How is the night going?¶

In addition to our assiduously recorded observation logs during our observations, it can be useful to tools to go back and look at all the data that were gathered withn a given night. Here are a few options for looking quickly at lots of images!

Use ds9¶

If you open a bunch of images in different frame of ds9, you can hold down the <tab> button to flip through them. To open lots of images, either...

• Set ds9 to be your computer's default application for open *.fits files, and then select many files and double click on them.
• From the command line run ds9 *.fits to open all FITS files in the current directory.

Once you have many images in ds9, you can change the center, zoom, rotation, scale, limits, and colorbar on one image, and then use Frame > Match > ... to make all the other frames line up correspondingly. Common options might be Scale and Limits (linear vs log, and the upper lower limits), Colorbar (where the grayscale is centered), Frame > Image (center, zoom, rotation).

Use illumination to animate a collection of images¶

These animations rely on the illumination package, which has sat dormant for a while, b

In [1]:

from illumination import *

from illumination import *

Let's watch what the guider saw all night:

In [2]:

path = "/Users/zach/Data/APO/kcam/UT240911/*.fits"
s = FITS_Sequence(path, ext_image=0)
i = imshowIllustration(data=s, cmapkw=dict(vmin=30, vmax=60000))
i.animate("guider.mp4", dpi=300)
#i.plot()

path = "/Users/zach/Data/APO/kcam/UT240911/*.fits" s = FITS_Sequence(path, ext_image=0) i = imshowIllustration(data=s, cmapkw=dict(vmin=30, vmax=60000)) i.animate("guider.mp4", dpi=300) #i.plot()

                [fits-sequence] populating <fits-sequence of 605 images of shape (1024, 1024)>
                                information from the headers
                [fits-sequence] unable to extract temporal things from headers for <fits-sequence of
                                605 images of shape (1024, 1024)>
                [fits-sequence] making up fake times
                  [imshowframe] plotting <F"image"> for the first time
                  [imshowframe] {'vmin': 30, 'vmax': 60000}
           [imshowillustration] {'vmin': 30, 'vmax': 60000}
           [imshowillustration] included <F"image"> in the shared color scheme

           [imshowillustration] defined color scheme with   cmap=Blues
                                norm=<matplotlib.colors.LogNorm object at 0x280575b20>  ticks=[30,
                                1341.640786499874, 60000]
                  [imshowframe] added image of shape (1024, 1024) to <F"image">
                  [imshowframe] making sure a shared colorbar is set up for <F"image">
                  [imshowframe] added a shared colorbar for <I"imshowIllustration">
           [imshowillustration] adding a new colorbar for 1 frame(s)
                  [imshowframe] added time label of "#0" on <F"image">
                  [imshowframe] added arrows on <F"image">
                  [imshowframe] added title of "" to <F"image">
           [imshowillustration] about to animate 606 times at 1.0s cadence for
                                <I"imshowIllustration">
           [imshowillustration] 30 frames/second :
           [imshowillustration] the animation will be saved to guider.mp4
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           [imshowillustration] 
           [imshowillustration] the animation is finished!

In [3]:

from IPython.display import Video
Video('guider.mp4')

from IPython.display import Video Video('guider.mp4')

Out[3]:

Let's watch all the science images associated with a particular target:

In [4]:

path = "/Users/zach/Data/APO/Q3CU04/UT240911/kosmos/wide_slit_red_LTT1445.*.fits"
s = FITS_Sequence(path, ext_image=0)
i = imshowIllustration(data=s, cmapkw=dict(vmin=3500, vmax=35000))
i.animate("science.mp4");

path = "/Users/zach/Data/APO/Q3CU04/UT240911/kosmos/wide_slit_red_LTT1445.*.fits" s = FITS_Sequence(path, ext_image=0) i = imshowIllustration(data=s, cmapkw=dict(vmin=3500, vmax=35000)) i.animate("science.mp4");

                [fits-sequence] populating <fits-sequence of 183 images of shape (2048, 1124)>
                                information from the headers
                [fits-sequence] unable to extract temporal things from headers for <fits-sequence of
                                183 images of shape (2048, 1124)>
                [fits-sequence] making up fake times
                  [imshowframe] plotting <F"image"> for the first time
                  [imshowframe] {'vmin': 3500, 'vmax': 35000}
           [imshowillustration] {'vmin': 3500, 'vmax': 35000}
           [imshowillustration] included <F"image"> in the shared color scheme

           [imshowillustration] defined color scheme with   cmap=Blues
                                norm=<matplotlib.colors.LogNorm object at 0x282453da0>  ticks=[3500,
                                11067.971810589328, 35000]
                  [imshowframe] added image of shape (2048, 1124) to <F"image">
                  [imshowframe] making sure a shared colorbar is set up for <F"image">
                  [imshowframe] added a shared colorbar for <I"imshowIllustration">
           [imshowillustration] adding a new colorbar for 1 frame(s)
                  [imshowframe] added time label of "#0" on <F"image">
                  [imshowframe] added arrows on <F"image">
                  [imshowframe] added title of "" to <F"image">
           [imshowillustration] about to animate 183 times at 1.0s cadence for
                                <I"imshowIllustration">
           [imshowillustration] 30 frames/second :
           [imshowillustration] the animation will be saved to science.mp4
           [imshowillustration]   1/183 at 2024-09-12 17:20:11.335

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           [imshowillustration] 
           [imshowillustration] the animation is finished!

In [5]:

Video('science.mp4')

Video('science.mp4')

Out[5]:

Let's include a panel that zooms in on a particular part of the detector.

In [6]:

path = "/Users/zach/Data/APO/Q3CU04/UT240911/kosmos/wide_slit_red_LTT1445.*.fits"
s = FITS_Sequence(path, ext_image=0)
i = SingleCameraWithZoomIllustration(
    data=s,
    cmapkw=dict(vmin=3500, vmax=35000),
    zoomposition=(487, 512),
    zoomsize=(100, 100),
)
i.animate("science-with-zoom.mp4");

path = "/Users/zach/Data/APO/Q3CU04/UT240911/kosmos/wide_slit_red_LTT1445.*.fits" s = FITS_Sequence(path, ext_image=0) i = SingleCameraWithZoomIllustration( data=s, cmapkw=dict(vmin=3500, vmax=35000), zoomposition=(487, 512), zoomsize=(100, 100), ) i.animate("science-with-zoom.mp4");

                [fits-sequence] populating <fits-sequence of 183 images of shape (2048, 1124)>
                                information from the headers
                [fits-sequence] unable to extract temporal things from headers for <fits-sequence of
                                183 images of shape (2048, 1124)>
                [fits-sequence] making up fake times
                  [cameraframe] plotting <F"camera"> for the first time
                  [cameraframe] {'vmin': 3500, 'vmax': 35000}
[singlecamerawithzoomillustration] {'vmin': 3500, 'vmax': 35000}
[singlecamerawithzoomillustration] included <F"camera"> in the shared color scheme
[singlecamerawithzoomillustration] included <F"zoom"> in the shared color scheme

[singlecamerawithzoomillustration] defined color scheme with   cmap=Blues
                                   norm=<matplotlib.colors.LogNorm object at 0x288830830>
                                   ticks=[3500, 11067.971810589328, 35000]
                  [cameraframe] added image of shape (2048, 1124) to <F"camera">
                  [cameraframe] making sure a shared colorbar is set up for <F"camera">
                  [cameraframe] added a shared colorbar for <I"SingleCameraWithZoomIllustration">
[singlecamerawithzoomillustration] adding a new colorbar for 2 frame(s)
                  [cameraframe] added time label of "#0" on <F"camera">
                  [cameraframe] added arrows on <F"camera">
                  [cameraframe] added title of "" to <F"camera">
                    [zoomframe] plotting <F"zoom"> for the first time
                    [zoomframe] {'vmin': 3500, 'vmax': 35000}
[singlecamerawithzoomillustration] {'vmin': 3500, 'vmax': 35000}
                    [zoomframe] added image of shape (100, 100) to <F"zoom">
[singlecamerawithzoomillustration] about to animate 183 times at 1.0s cadence for
                                   <I"SingleCameraWithZoomIllustration">
[singlecamerawithzoomillustration] 30 frames/second :
[singlecamerawithzoomillustration] the animation will be saved to science-with-zoom.mp4
[singlecamerawithzoomillustration]   1/183 at 2024-09-12 17:20:24.618

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[singlecamerawithzoomillustration] 
[singlecamerawithzoomillustration] the animation is finished!

In [7]:

Video('science-with-zoom.mp4')

Video('science-with-zoom.mp4')

Out[7]:

Let's include some local zoom windows directly on top of the science image.

In [8]:

i = imshowIllustration(data=s, cmapkw=dict(vmin=3500, vmax=10000))
add_zoom(i, position=(487, 512), size=(50, 50), zoom=8, frame="image")
add_zoom(i, position=(487, 1024), size=(50, 50), zoom=8, frame="image")
add_zoom(i, position=(487, 1536), size=(50, 50), zoom=8, frame="image")
i.animate("science-with-lots-of-zoom.mp4", dpi=200)

i = imshowIllustration(data=s, cmapkw=dict(vmin=3500, vmax=10000)) add_zoom(i, position=(487, 512), size=(50, 50), zoom=8, frame="image") add_zoom(i, position=(487, 1024), size=(50, 50), zoom=8, frame="image") add_zoom(i, position=(487, 1536), size=(50, 50), zoom=8, frame="image") i.animate("science-with-lots-of-zoom.mp4", dpi=200)

                  [imshowframe] plotting <F"image"> for the first time
                  [imshowframe] {'vmin': 3500, 'vmax': 10000}
           [imshowillustration] {'vmin': 3500, 'vmax': 10000}
           [imshowillustration] included <F"image"> in the shared color scheme
           [imshowillustration] included <F"zoom"> in the shared color scheme
           [imshowillustration] included <F"zoom"> in the shared color scheme
           [imshowillustration] included <F"zoom"> in the shared color scheme

           [imshowillustration] defined color scheme with   cmap=Blues
                                norm=<matplotlib.colors.LogNorm object at 0x282415070>  ticks=[3500,
                                5916.079783099616, 10000]
                  [imshowframe] added image of shape (2048, 1124) to <F"image">
                  [imshowframe] making sure a shared colorbar is set up for <F"image">
                  [imshowframe] added a shared colorbar for <I"imshowIllustration">
           [imshowillustration] adding a new colorbar for 1 frame(s)
                  [imshowframe] added time label of "#0" on <F"image">
                  [imshowframe] added arrows on <F"image">
                  [imshowframe] added title of "" to <F"image">
                  [imshowframe] {}
           [imshowillustration] {}
                  [imshowframe] {}
           [imshowillustration] {}
                  [imshowframe] {}
           [imshowillustration] {}
           [imshowillustration] about to animate 183 times at 1.0s cadence for
                                <I"imshowIllustration">
           [imshowillustration] 30 frames/second :
           [imshowillustration] the animation will be saved to science-with-lots-of-zoom.mp4
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           [imshowillustration] 
           [imshowillustration] the animation is finished!

In [9]:

Video('science-with-lots-of-zoom.mp4')

Video('science-with-lots-of-zoom.mp4')

Out[9]: